Disease: Oligospermia
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs553509
H2BW1
0.925 0.040 X 104013293 missense variant T/C snv 0.38 3
rs6080550
LOC100289473
0.851 0.040 20 1778944 intron variant C/G;T snv 9.6E-02 5
rs188541504
THEG
0.925 0.040 19 374362 missense variant C/T snv 8.0E-05 4.9E-05 3
rs2228611
DNMT1
0.708 0.520 19 10156401 synonymous variant T/A;C snv 0.52 19
rs7174015
USP8
0.925 0.040 15 50424871 intron variant G/A;T snv 3
rs175080
MLH3
0.776 0.240 14 75047125 missense variant G/A snv 0.40 0.43 9
rs12870438
EPSTI1
0.925 0.040 13 42906069 intron variant G/A snv 0.27 3
rs144848
BRCA2
0.653 0.440 13 32332592 missense variant A/C snv 0.28 0.23 29
rs10842262
SOX5
0.851 0.040 12 24031610 intron variant G/C snv 0.43 5
rs4474514
KITLG
0.827 0.240 12 88560182 intron variant G/A snv 0.65 6
rs995030
KITLG
0.776 0.320 12 88496894 3 prime UTR variant A/G snv 0.67 9
rs12348
TUSC1
0.925 0.040 9 25677217 3 prime UTR variant T/C snv 0.44 3
rs7867029
LOC107987083
0.925 0.040 9 78405502 intergenic variant G/C snv 0.22 3
rs10269148
STRA8
0.925 0.040 7 135230056 upstream gene variant C/A;G snv 2
rs1059060
PMS2
0.925 0.040 7 5977709 missense variant T/A;C snv 3
rs1248142939
PMS2
0.925 0.040 7 5992006 missense variant G/A snv 2
rs17420802
PMS2
0.925 0.040 7 5977709 missense variant T/A;C snv 2.5E-04 2
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs587781908
PMS2
0.925 0.040 7 6005973 missense variant A/G snv 1.2E-05 2
rs763468927
PMS2
0.925 0.040 7 5977755 missense variant G/A snv 4.0E-06 7.0E-06 2
rs864622096
PMS2
0.925 0.040 7 5986916 missense variant G/A snv 2
rs2075789
MSH5-SAPCD1 ; LOC105375020 ; MSH5
0.882 0.120 6 31740551 missense variant C/T snv 0.13 9.1E-02 6
rs724078 0.925 0.040 6 29521271 intergenic variant G/A snv 0.41 3
rs1801394
FASTKD3 ; MTRR
0.531 0.840 5 7870860 missense variant A/G snv 0.47 0.45 101
rs121918346
DAZL
0.882 0.040 3 16598169 missense variant T/C;G snv 8.0E-06 5